Motif-based sequence analysis tools

The MEME Suite allows you to:
- discover motifs using MEME, DREME (DNA only) or GLAM2 on groups of related DNA or protein sequences,
- search sequence databases with motifs using MAST, FIMO, MCAST or GLAM2SCAN,
- compare a motif to all motifs in a database of motifs,
- associate motifs with Gene Ontology terms via their putative target genes, and
- analyse motif enrichment using SpaMo or CentriMo.
To submit a query, click on one of the logos below or select “Submit A Job” from the menu at the left.

Maintenance and development of the MEME Suite is funded by the National Center for Research Resources grant NIH/NCRR R01 RR021692. The MEME Suite web server is funded by the National Biomedical Computation Resource.
Developed and maintained by:
